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Intron Name: Anas_platyrhynchos_platyrhynchos_3_68712664_68713034_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

68712664 - 68713034

Intron Length:

371

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TTTACCGTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAC

U12 Branch Point Sequence:

AGACCACTAACT

Flanking Amino Acid:

EPRYETGVCAYLVAVGCELN

Intron Amino Acid Position:

115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

80.8

34.4

Major BPS

71.4

0.53

1.1

63.4

Major PPT

79.7

0.67

0.9

73.3

36.9

Minor 5ss

44.3

-0.6

2.9

62.8

41.9

Minor BPS

48.9

-0

1.9

68.59

40.9

Associated Gene:

Gene:

CCN6

Ensembl Gene ID:

ENSAPLG00000014838

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018054

68711907 - 68716085

4179

ENSAPLT00000015459

68710418 - 68716073

5656