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Intron Name: Anas_platyrhynchos_platyrhynchos_3_68833517_68869344_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

68833517 - 68869344

Intron Length:

35828

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTCCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATCAT

U12 Branch Point Sequence:

AATGTGTGAACG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.5

Major BPS

0.57

1.2

41.2

Major PPT

81.5

0.71

0.7

74.1

Minor 5ss

40.3

-1.1

3.1

56.2

42.2

Minor BPS

44.3

-0.5

2.2

51.27

Associated Gene:

Gene:

FYN

Ensembl Gene ID:

ENSAPLG00000014917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015584

68833446 - 68909245

75800