Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_68900467_68909036_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

68900467 - 68909036

Intron Length:

8570

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

CTGTCCTTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTCAG

U12 Branch Point Sequence:

CTGTCCTTAACA

Flanking Amino Acid:

LVTKGRVPYPGMNNREVLEQ

Intron Amino Acid Position:

466

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.7

23.7

Major BPS

54.4

0.11

1.4

63.4

35.6

Major PPT

0.54

0.9

69.4

35.6

Minor 5ss

32.8

-2

2.9

39.7

45.8

Minor BPS

83.6

1.05

1.1

83.14

Associated Gene:

Gene:

FYN

Ensembl Gene ID:

ENSAPLG00000014917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015584

68833446 - 68909245

75800