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Intron Name: Anas_platyrhynchos_platyrhynchos_3_69090698_69092497_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

69090698 - 69092497

Intron Length:

1800

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTGACCCCT

5'SS Class:

weak_major

3'SS Sequence:

CTTTGCACTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAC

U12 Branch Point Sequence:

AGGCTTTGCACT

Flanking Amino Acid:

GASMGVLDTGNFAIGAFVAP

Intron Amino Acid Position:

105

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.5

0.25

1.2

Major BPS

65.1

0.38

1.4

77.4

37.4

Major PPT

78.4

0.64

0.9

74.6

34.9

Minor 5ss

42.3

-0.8

3.1

57.7

40.8

Minor BPS

43.6

-0.4

1.8

56.83

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030380

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020105

69089539 - 69098503

8965