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Intron Name: Anas_platyrhynchos_platyrhynchos_3_6915442_6915844_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6915442 - 6915844

Intron Length:

403

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTGAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

GTTCCTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTCAA

U12 Branch Point Sequence:

TTTTCCTCTCTT

Flanking Amino Acid:

VNKNVKDAMAKIQAKIPGLK

Intron Amino Acid Position:

998

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.8

86.7

22.9

Major BPS

77.9

0.69

0.8

77.9

25.8

Major PPT

85.8

0.81

0.8

80.4

31.6

Minor 5ss

42.4

-0.8

58.5

40.4

Minor BPS

42.9

-0.4

3.7

80.22

41.9

Associated Gene:

Gene:

RTN4

Ensembl Gene ID:

ENSAPLG00000005665

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025046

6902497 - 6915887

13391

ENSAPLT00000005947

6882880 - 6915887

33008