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Intron Name: Anas_platyrhynchos_platyrhynchos_3_69246884_69246971_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

69246884 - 69246971

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGTATG

5'SS Class:

strong_major

3'SS Sequence:

GTATCATATATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TATTTATTATAT

Flanking Amino Acid:

YCMGRMNSDCWYLYTLDFPE

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

0.9

76.2

Major BPS

88.7

0.96

0.8

36.5

Major PPT

65.4

0.35

59.1

Minor 5ss

45.6

-0.5

2.5

56.4

42.4

Minor BPS

52.1

0.14

1.9

75.57

40.5

Associated Gene:

Gene:

AMD1

Ensembl Gene ID:

ENSAPLG00000014874

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015526

69244779 - 69259075

14297