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Intron Name: Anas_platyrhynchos_platyrhynchos_3_69366182_69367383_F


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
69366182 - 69367383

Intron Length:
1202

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAG|GTAAACATC

5'SS Class:
strong_major

3'SS Sequence:
TTGCATATTCCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATATAAA

U12 Branch Point Sequence:
TTTTGCATATTC

Flanking Amino Acid:
EGPERGRVKIADMGFARLFN

Intron Amino Acid Position:
172

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.3
0.76
1
78.6
35.9

Major BPS
69.8
0.49
1
70.3
31.8

Major PPT
75.8
0.58
1
66.5
43.6

Minor 5ss
43.3
-0.7
3
60.2
44.5

Minor BPS
49.1
-0
2.2
71.03
40.7

Associated Gene:

Gene:
CDK19

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

69286716 - 69394070
107355

69286716 - 69390443
103728