Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_69381328_69382515_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

69381328 - 69382515

Intron Length:

1188

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

CAATATTTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATTAT

U12 Branch Point Sequence:

CTTTGTTTAACA

Flanking Amino Acid:

PTLQKDFRRTTYANSSLIKY

Intron Amino Acid Position:

287

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

1.2

81.4

32.7

Major BPS

75.9

0.64

66.1

40.5

Major PPT

76.9

0.61

0.9

73.3

41.1

Minor 5ss

35.7

-1.6

3.3

48.3

41.3

Minor BPS

69.3

0.6

1.8

78.6

38.6

Associated Gene:

Gene:

CDK19

Ensembl Gene ID:

ENSAPLG00000014702

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024631

69286716 - 69394070

107355

ENSAPLT00000021364

69286716 - 69394070

107355

ENSAPLT00000015347

69286716 - 69390443

103728

ENSAPLT00000038796

69323293 - 69394070

70778