Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_69387061_69390209_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

69387061 - 69390209

Intron Length:

3149

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATAATAA

5'SS Class:

major

3'SS Sequence:

GGCCGCGCCGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACCTCAG

U12 Branch Point Sequence:

AGCACCTCAGCA

Flanking Amino Acid:

EDEPEEKGDKPPQQQQQNST

Intron Amino Acid Position:

371

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

31.3

Major BPS

49.8

-0

1.5

59.3

39.1

Major PPT

54.9

0.11

45.8

36.6

Minor 5ss

42.7

-0.8

55.5

48.7

Minor BPS

47.5

-0.1

1.8

56.08

42.5

Associated Gene:

Gene:

CDK19

Ensembl Gene ID:

ENSAPLG00000014702

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015347

69286716 - 69390443

103728