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Intron Name: Anas_platyrhynchos_platyrhynchos_3_69687613_69688474_R


Intron Information:

Intron Rank:
18

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
69687613 - 69688474

Intron Length:
862

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACG|GTATATTTG

5'SS Class:
major

3'SS Sequence:
TCTCTTTTGCCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TGCTTAT

U12 Branch Point Sequence:
TTTTGCTTATGG

Flanking Amino Acid:
TFCLAMTNSTRDFMPKNMGI

Intron Amino Acid Position:
699

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.9
0.47
1.1
65.1
41.4

Major BPS
76.2
0.65
1.1
65.7
43.2

Major PPT
81
0.7
0.9
76.2
37.8

Minor 5ss
49.7
-0
2.5
66.5
44.9

Minor BPS
49.8
-0.1
2.3
66.83
46.9

Associated Gene:

Gene:
FIG4

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

69663858 - 69726540
62683