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Intron Name: Anas_platyrhynchos_platyrhynchos_3_70007147_70008434_F


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
70007147 - 70008434

Intron Length:
1288

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACT|GTGAGTATC

5'SS Class:
major

3'SS Sequence:
TCTCCTTTTCAAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTGTTAC

U12 Branch Point Sequence:
GGGAAATGAACT

Flanking Amino Acid:
GVDDIHASPTTTESVCEVEA

Intron Amino Acid Position:
300

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73
0.54
1.1
74.7
35.4

Major BPS
71.4
0.53
1.2
63.4
44

Major PPT
76.1
0.59
1
74.7
33.9

Minor 5ss
37.8
-1.4
3
55.7
41.6

Minor BPS
44.1
-0.3
1.9
58.32
43.2

Associated Gene:

Gene:
SESN1

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

69942302 - 70011573
69272

69942302 - 70011573
69272