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Intron Name: Anas_platyrhynchos_platyrhynchos_3_70167476_70230711_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

70167476 - 70230711

Intron Length:

63236

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTCCCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTGAC

U12 Branch Point Sequence:

CTGGCCTTGACG

Flanking Amino Acid:

GDSNSSAGWKNSIRHNLSLH

Intron Amino Acid Position:

200

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.2

37.4

Major BPS

61.6

0.29

1.1

54.6

40.8

Major PPT

80.8

0.69

0.7

75.8

26.4

Minor 5ss

23.1

-3.1

3.2

43.5

Minor BPS

62.5

0.25

1.6

62.04

46.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011319

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011774

70154058 - 70231308

77251