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Intron Name: Anas_platyrhynchos_platyrhynchos_3_70342039_70342298_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

70342039 - 70342298

Intron Length:

260

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCGGA

5'SS Class:

strong_major

3'SS Sequence:

ATCTGCTTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

CCACGCTGAACT

Flanking Amino Acid:

CLKCIVTFKAVPTHSGSELR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

65.1

41.1

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

79.8

0.67

0.9

73.2

36.6

Minor 5ss

35.8

-1.6

3.3

43.9

45.7

Minor BPS

48.2

-0

1.9

63.09

46.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021471

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019719

70340168 - 70342933

2766