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Intron Name: Anas_platyrhynchos_platyrhynchos_3_70440814_70444366_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

70440814 - 70444366

Intron Length:

3553

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

TCTTTCTTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

GTATTGATAACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.1

74.7

35.4

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

81.8

0.72

0.9

86.8

24.5

Minor 5ss

38.9

-1.2

2.8

55.7

41.6

Minor BPS

48.3

-0.1

2.3

65.7

40.3

Associated Gene:

Gene:

SEC63

Ensembl Gene ID:

ENSAPLG00000010176

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010671

70440699 - 70478410

37712