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Intron Name: Anas_platyrhynchos_platyrhynchos_3_70534383_70534493_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

70534383 - 70534493

Intron Length:

111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTACAGCGT

5'SS Class:

weak_major

3'SS Sequence:

CTTCCTCCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTGGAT

U12 Branch Point Sequence:

TGCAGCTGGAGG

Flanking Amino Acid:

DYLVDPVHMKRHRPTQTSSG

Intron Amino Acid Position:

224

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.8

0.23

1.2

49.1

46.9

Major BPS

56.3

0.16

1.5

57.1

49.4

Major PPT

82.9

0.74

0.7

77.1

24.8

Minor 5ss

31.2

-2.1

3.7

46.9

48.5

Minor BPS

38.8

-1

2.1

40.56

43.6

Associated Gene:

Gene:

SCML4

Ensembl Gene ID:

ENSAPLG00000010070

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010488

70517516 - 70546186

28671