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Intron Name: Anas_platyrhynchos_platyrhynchos_3_70534601_70542061_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

70534601 - 70542061

Intron Length:

7461

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAATTTAA

5'SS Class:

major

3'SS Sequence:

TTTGTACCTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGTAC

U12 Branch Point Sequence:

TTTTTTGTACCT

Flanking Amino Acid:

NGTYPEGNRSASSPSPEQDS

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

74.8

30.7

Major BPS

61.6

0.29

1.4

63.4

Major PPT

0.7

0.9

74.1

35.7

Minor 5ss

39.7

-1.2

2.8

46.3

44.2

Minor BPS

54.3

0.21

2.2

82.56

39.6

Associated Gene:

Gene:

SCML4

Ensembl Gene ID:

ENSAPLG00000010070

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010488

70517516 - 70546186

28671