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Intron Name: Anas_platyrhynchos_platyrhynchos_3_70542205_70546060_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

70542205 - 70546060

Intron Length:

3856

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTATGTAAA

5'SS Class:

major

3'SS Sequence:

CTTTTGAAACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CACATTTTAATT

Flanking Amino Acid:

GPHVELFRKHEIDGNALLLL

Intron Amino Acid Position:

308

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.3

75.9

35.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

67.1

0.39

1.1

60.3

Minor 5ss

42.5

-0.8

2.5

49.6

40.4

Minor BPS

57.3

0.31

1.3

64.56

40.8

Associated Gene:

Gene:

SCML4

Ensembl Gene ID:

ENSAPLG00000010070

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010488

70517516 - 70546186

28671