Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_7062642_7062982_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7062642 - 7062982

Intron Length:

341

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

GGTCTTCTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

TGGATTTTAACA

Flanking Amino Acid:

NEYLFQAKDDEEMNTWIQAI

Intron Amino Acid Position:

2013

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

80.8

34.4

Major BPS

89.7

0.98

0.7

89.9

Major PPT

68.2

0.41

1.1

67.8

Minor 5ss

46.2

-0.4

2.8

62.9

41.8

Minor BPS

64.9

0.46

1.3

68.16

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007461

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007827

7062426 - 7107116

44691