Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_70665024_70666858_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

70665024 - 70666858

Intron Length:

1835

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGAGA

5'SS Class:

major

3'SS Sequence:

TTGTGTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TTGTGTTTTACA

Flanking Amino Acid:

ESRQHISVLKENSLPKPKLP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

71.5

39.9

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

85.5

0.8

0.9

79.9

37.7

Minor 5ss

31.7

-2.1

3.1

40.5

45.2

Minor BPS

54.2

0.13

2.1

70.62

41.9

Associated Gene:

Gene:

SOBP

Ensembl Gene ID:

ENSAPLG00000019216

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035716

70582912 - 70676252

93341

ENSAPLT00000042232

70582912 - 70676252

93341