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Intron Name: Anas_platyrhynchos_platyrhynchos_3_70939783_70940465_R


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
70939783 - 70940465

Intron Length:
683

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAACGCTT

5'SS Class:
major

3'SS Sequence:
ATCTCTTGGACAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATTTAT

U12 Branch Point Sequence:
TTATTTATATCT

Flanking Amino Acid:
VSKLCIGIPKLSSVATDNPK

Intron Amino Acid Position:
375

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.3
0.64
1.2
73.4
43.3

Major BPS
88.7
0.96
0.8
78
36.5

Major PPT
67.6
0.4
1.1
64.5
40.9

Minor 5ss
42.2
-0.9
3.5
64.9
46.4

Minor BPS
53.9
0.2
1.8
77.16
39.4

Associated Gene:

Gene:
QRSL1

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

70925776 - 70948199
22424

70935065 - 70948199
13135