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Intron Name: Anas_platyrhynchos_platyrhynchos_3_70944845_70946292_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
70944845 - 70946292

Intron Length:
1448

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACAGTAG

5'SS Class:
major

3'SS Sequence:
TGATTGTTTTCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTCTGAT

U12 Branch Point Sequence:
ACTCCCTTAACT

Flanking Amino Acid:
ETTCASNMLKGYIPPYNATV

Intron Amino Acid Position:
187

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.2
0.48
1.1
60.1
41.3

Major BPS
91.3
1.03
0.7
79.6
35.6

Major PPT
80.2
0.68
0.9
77.1
41.8

Minor 5ss
34.4
-1.8
3.5
46
49.3

Minor BPS
81.7
1.07
1.1
88.17
36.6

Associated Gene:

Gene:
QRSL1

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

70925776 - 70948199
22424

70925776 - 70948199
22424

70935065 - 70948199
13135

70935065 - 70948199
13135