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Intron Name: Anas_platyrhynchos_platyrhynchos_3_70949842_70950175_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

70949842 - 70950175

Intron Length:

334

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGATGTCA

5'SS Class:

major

3'SS Sequence:

TGTTTGTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTGAT

U12 Branch Point Sequence:

AGTCACAAAAGT

Flanking Amino Acid:

SVSYFKPGDEVWAAIPPWKQ

Intron Amino Acid Position:

193

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

67.3

33.8

Major BPS

72.4

0.56

1.1

63.1

44.4

Major PPT

82.9

0.74

0.8

81.2

36.5

Minor 5ss

31.6

-2.1

3.2

39.3

Minor BPS

40.4

-0.6

2.2

58.93

43.4

Associated Gene:

Gene:

RTN4IP1

Ensembl Gene ID:

ENSAPLG00000009151

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009544

70947922 - 70968041

20120