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Intron Name: Anas_platyrhynchos_platyrhynchos_3_70950634_70955218_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

70950634 - 70955218

Intron Length:

4585

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TAAATTTTAATT

Flanking Amino Acid:

GLNQSNCSGKRVLILGASGG

Intron Amino Acid Position:

257

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.4

1.12

0.6

90.5

20.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.97

0.6

88.1

21.9

Minor 5ss

-1.6

2.7

44.9

43.2

Minor BPS

65.3

0.56

1.2

74.23

36.6

Associated Gene:

Gene:

RTN4IP1

Ensembl Gene ID:

ENSAPLG00000009151

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009544

70947922 - 70968041

20120