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Intron Name: Anas_platyrhynchos_platyrhynchos_3_70959144_70960492_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

70959144 - 70960492

Intron Length:

1349

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTTGAC

5'SS Class:

major

3'SS Sequence:

ATTTTTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ATGTTTTTGATT

Flanking Amino Acid:

GVTIGSKTVKHLLKGVHYRW

Intron Amino Acid Position:

381

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

70.3

33.7

Major BPS

90.4

0.7

90.2

19.3

Major PPT

90.3

0.91

0.7

85.5

28.4

Minor 5ss

39.1

-1.2

3.1

52.1

45.1

Minor BPS

65.6

0.57

1.1

75.74

35.5

Associated Gene:

Gene:

RTN4IP1

Ensembl Gene ID:

ENSAPLG00000009151

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009544

70947922 - 70968041

20120