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Intron Name: Anas_platyrhynchos_platyrhynchos_3_70970269_70973067_R


Intron Information:

Intron Rank:
21

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
70970269 - 70973067

Intron Length:
2799

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAGCAAA

5'SS Class:
strong_major

3'SS Sequence:
TTTTCCTTCGCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
ATTTCAC

U12 Branch Point Sequence:
TGCTCTTTGAAT

Flanking Amino Acid:
MKPKLVLDIKGGSQYDRDHV

Intron Amino Acid Position:
1720

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
91.1
0.97
0.8
83.2
30.8

Major BPS
81.3
0.78
0.8
83.4
26.1

Major PPT
88.6
0.87
0.6
84.5
23.1

Minor 5ss
38.7
-1.3
2.8
48.1
47.6

Minor BPS
65.1
0.56
1.4
76.77
39.9

Associated Gene:

Gene:
CRYBG1

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

70969503 - 71064819
95317

70969503 - 71067357
97855

70969503 - 71055777
86275

70969503 - 71015949
46447