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Intron Name: Anas_platyrhynchos_platyrhynchos_3_70973231_70976065_R


Intron Information:

Intron Rank:
20

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
70973231 - 70976065

Intron Length:
2835

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CGG|GTAGGGTTC

5'SS Class:
major

3'SS Sequence:
TCTGGTTATATAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTGAG

U12 Branch Point Sequence:
TTTTGAGTAATT

Flanking Amino Acid:
VYQDGFIRCRMAEDCCLTIV

Intron Amino Acid Position:
1666

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.9
0.52
1.1
64.8
42.3

Major BPS
72.4
0.56
1.5
71.4
45.1

Major PPT
70.8
0.47
1
65.2
40.4

Minor 5ss
39.5
-1.2
3.6
49.5
47.1

Minor BPS
48.7
-0
2.5
80.74
41.5

Associated Gene:

Gene:
CRYBG1

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

70969503 - 71055777
86275

70969503 - 71015949
46447

70969503 - 71064819
95317

70969503 - 71067357
97855