Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_70996467_70997412_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

70996467 - 70997412

Intron Length:

946

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTCATTTTGTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TCTTCTTCATTT

Flanking Amino Acid:

VIGSIRHVVKDYRVSRIDLY

Intron Amino Acid Position:

1152

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.3

1.16

0.7

90.9

28.7

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

79.6

0.67

80.3

37.1

Minor 5ss

27.1

-2.6

3.8

41.5

45.1

Minor BPS

56.5

0.28

1.8

75.55

42.1

Associated Gene:

Gene:

CRYBG1

Ensembl Gene ID:

ENSAPLG00000008606

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042117

70969503 - 71067357

97855

ENSAPLT00000033405

70969503 - 71055777

86275

ENSAPLT00000008950

70969503 - 71015949

46447

ENSAPLT00000045488

70969503 - 71064819

95317