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Intron Name: Anas_platyrhynchos_platyrhynchos_3_70999076_70999173_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
70999076 - 70999173

Intron Length:
98

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAGATCA

5'SS Class:
strong_major

3'SS Sequence:
GTTTTAAACACAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAA

U12 Branch Point Sequence:
TTTGTTTTAAAC

Flanking Amino Acid:
QSKINPRPGKLVIYCESDYQ

Intron Amino Acid Position:
1061

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
91.4
0.98
0.8
80.4
27.6

Major BPS
90.4
1
0.7
90.2
19.3

Major PPT
69.4
0.44
1
63.2
41.2

Minor 5ss
38.2
-1.3
3
48.6
47.1

Minor BPS
65.8
0.48
1.5
74.65
36.2

Associated Gene:

Gene:
CRYBG1

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

70969503 - 71067357
97855

70969503 - 71055777
86275

70969503 - 71015949
46447

70969503 - 71064819
95317