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Intron Name: Anas_platyrhynchos_platyrhynchos_3_71198040_71201152_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

71198040 - 71201152

Intron Length:

3113

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGCAGG

5'SS Class:

major

3'SS Sequence:

CTCTCTGTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

ATATATATAATC

Flanking Amino Acid:

KNANRKYFWRIYSSGELHHF

Intron Amino Acid Position:

102

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

63.6

48.1

Major BPS

0.72

78.4

31.2

Major PPT

80.4

0.68

0.8

72.1

37.9

Minor 5ss

38.3

-1.3

2.8

40.5

45.4

Minor BPS

50.5

-0

1.7

63.72

35.3

Associated Gene:

Gene:

PRDM1

Ensembl Gene ID:

ENSAPLG00000013593

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034484

71187766 - 71286194

98429

ENSAPLT00000022189

71187766 - 71285467

97702

ENSAPLT00000014161

71187766 - 71208668

20903

ENSAPLT00000044288

71187766 - 71239787

52022