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Intron Name: Anas_platyrhynchos_platyrhynchos_3_71704604_71705133_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

71704604 - 71705133

Intron Length:

530

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAGTG

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTTCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTAATTTTAATT

Flanking Amino Acid:

LRPTEEGIFQVTLTAETDCR

Intron Amino Acid Position:

201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

0.9

72.3

37.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

81.4

0.71

0.8

77.2

31.6

Minor 5ss

33.4

-1.9

3.6

46.6

48.7

Minor BPS

63.4

0.5

1.3

72.54

39.1

Associated Gene:

Gene:

POPDC3

Ensembl Gene ID:

ENSAPLG00000022652

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020488

71702221 - 71705451

3231