Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_7176_7640_F

Intron Information:

Intron Rank:

149695

Intron Class:

major

Intron Phase:

Intron Coordinates:

7176 - 7640

Intron Length:

465

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGT|GTAAGCACT

5'SS Class:

major

3'SS Sequence:

TCTGTGCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGAAAAT

U12 Branch Point Sequence:

CGGCACTGAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.7

0.46

1.2

68.3

42.6

Major BPS

55.4

0.14

1.3

61.7

41.5

Major PPT

71.3

0.48

0.9

61.9

Minor 5ss

-0.7

2.9

60.1

Minor BPS

44.6

-0.4

1.7

49.29

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030554

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034393

6741 - 23278

16538