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Intron Name: Anas_platyrhynchos_platyrhynchos_3_71899773_71901398_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

71899773 - 71901398

Intron Length:

1626

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGACTT

5'SS Class:

strong_major

3'SS Sequence:

ATCTTGTTCTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TGGTTTGTAAAT

Flanking Amino Acid:

VKRSLLHIAANCGSVECLVL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

78.3

36.2

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

74.9

0.56

0.8

73.2

36.6

Minor 5ss

39.6

-1.2

3.3

57.8

40.6

Minor BPS

48.8

-0

2.1

68.97

42.3

Associated Gene:

Gene:

HACE1

Ensembl Gene ID:

ENSAPLG00000006280

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006531

71895586 - 71942499

46914