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Intron Name: Anas_platyrhynchos_platyrhynchos_3_71904222_71904491_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

71904222 - 71904491

Intron Length:

270

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

ATTTTGAACTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TCATTTTGAACT

Flanking Amino Acid:

NICNNEGLTAIHWLAVNGRT

Intron Amino Acid Position:

135

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

78.5

35.5

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

66.1

0.36

64.2

41.2

Minor 5ss

40.6

-1.1

2.8

58.6

39.3

Minor BPS

0.55

1.4

76.98

39.7

Associated Gene:

Gene:

HACE1

Ensembl Gene ID:

ENSAPLG00000006280

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006531

71895586 - 71942499

46914