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Intron Name: Anas_platyrhynchos_platyrhynchos_3_71908594_71911064_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

71908594 - 71911064

Intron Length:

2471

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGATA

5'SS Class:

major

3'SS Sequence:

AATTGCTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTAATTAAAA

Flanking Amino Acid:

GVTPLDLCVQGGYGETCEVL

Intron Amino Acid Position:

239

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

73.3

37.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

74.3

0.55

0.9

70.8

40.1

Minor 5ss

-0.9

3.1

57.3

Minor BPS

62.8

0.4

1.9

79.52

35.6

Associated Gene:

Gene:

HACE1

Ensembl Gene ID:

ENSAPLG00000006280

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006531

71895586 - 71942499

46914