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Intron Name: Anas_platyrhynchos_platyrhynchos_3_71911167_71914106_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

71911167 - 71914106

Intron Length:

2940

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAATACAG

5'SS Class:

major

3'SS Sequence:

TTTAATAACCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATA

Flanking Amino Acid:

TQNEDLRENMLRQVLEHLSQ

Intron Amino Acid Position:

273

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

1.1

57.1

41.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

68.2

0.41

59.7

44.8

Minor 5ss

31.5

-2.1

3.1

36.4

41.6

Minor BPS

82.2

1.01

0.9

86.33

25.3

Associated Gene:

Gene:

HACE1

Ensembl Gene ID:

ENSAPLG00000006280

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006531

71895586 - 71942499

46914