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Intron Name: Anas_platyrhynchos_platyrhynchos_3_71922096_71923492_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

71922096 - 71923492

Intron Length:

1397

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTGAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAA

U12 Branch Point Sequence:

TTTCTCTAAACA

Flanking Amino Acid:

YMCCSCQMPQGMTSPRFIEF

Intron Amino Acid Position:

503

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

69.6

42.7

Major BPS

0.57

73.6

28.6

Major PPT

0.65

76.9

Minor 5ss

31.2

-2.2

3.1

31.4

42.6

Minor BPS

68.7

0.58

1.6

80.35

35.4

Associated Gene:

Gene:

HACE1

Ensembl Gene ID:

ENSAPLG00000006280

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006531

71895586 - 71942499

46914