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Intron Name: Anas_platyrhynchos_platyrhynchos_3_71925267_71925365_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

71925267 - 71925365

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTGTGC

5'SS Class:

major

3'SS Sequence:

TCTTTGTATTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

ATAAAATTAATT

Flanking Amino Acid:

NENDILLVHRDSIFRSSCEV

Intron Amino Acid Position:

593

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.1

59.4

40.4

Major BPS

0.82

0.8

24.9

Major PPT

82.6

0.73

0.9

35.7

Minor 5ss

43.2

-0.7

3.1

59.3

45.4

Minor BPS

51.7

0.13

1.8

70.91

39.3

Associated Gene:

Gene:

HACE1

Ensembl Gene ID:

ENSAPLG00000006280

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006531

71895586 - 71942499

46914