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Intron Name: Anas_platyrhynchos_platyrhynchos_3_71941961_71942396_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

71941961 - 71942396

Intron Length:

436

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TTTTCTTTGTTT

Flanking Amino Acid:

TANLLPTSSTCINMLKLPEY

Intron Amino Acid Position:

909

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

74.6

Major BPS

0.85

0.9

39.9

Major PPT

97.2

1.06

0.5

96.4

12.2

Minor 5ss

45.7

-0.4

2.5

54.4

45.2

Minor BPS

49.4

0.03

3.5

86.34

34.1

Associated Gene:

Gene:

HACE1

Ensembl Gene ID:

ENSAPLG00000006280

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006531

71895586 - 71942499

46914