About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_72207610_72211002_R


Intron Information:

Intron Rank:
144779

Intron Class:
major

Intron Phase:

Intron Coordinates:
72207610 - 72211002

Intron Length:
3393

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGG|GTGAGTTGT

5'SS Class:
strong_major

3'SS Sequence:
TGCCTATATGCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATTTGAT

U12 Branch Point Sequence:
GTGTGGTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.6
0.77
0.9
74.8
38.1

Major BPS
87.6
0.93
0.8
77.4
37.3

Major PPT
72
0.49
1
66.1
38.9

Minor 5ss
36
-1.6
2.9
40.9
45.4

Minor BPS
49.3
0.02
2.4
72.1
45.3

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

72185124 - 72211378
26255