Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_73456136_73480522_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

73456136 - 73480522

Intron Length:

24387

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGATGTTA

5'SS Class:

major

3'SS Sequence:

TTAATTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

GTTTTATTAATT

Flanking Amino Acid:

EKVCKMFISKEEPYVMFKKS

Intron Amino Acid Position:

410

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.1

0.4

67.4

33.7

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

85.5

0.8

80.1

37.1

Minor 5ss

36.6

-1.5

3.4

46.6

43.4

Minor BPS

0.74

1.5

85.63

34.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012994

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013531

73429180 - 73687819

258640