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Intron Name: Anas_platyrhynchos_platyrhynchos_3_7370149_7371129_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7370149 - 7371129

Intron Length:

981

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAACA

5'SS Class:

strong_major

3'SS Sequence:

GTCTCCTGTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

TACAGATCAATA

Flanking Amino Acid:

AHLNDPQPIEMTVKKTLSNF

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

76.8

31.6

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

74.4

0.55

68.9

37.1

Minor 5ss

33.1

-1.9

2.9

41.4

44.7

Minor BPS

41.8

-0.6

2.1

50.77

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018591

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028161

7364452 - 7371264

6813