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Intron Name: Anas_platyrhynchos_platyrhynchos_3_73908820_73909575_F


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
73908820 - 73909575

Intron Length:
756

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAATAAAT

5'SS Class:
strong_major

3'SS Sequence:
TTTCTGCTTATAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTACAAT

U12 Branch Point Sequence:
ATTGGCAGAATT

Flanking Amino Acid:
CFDPKELRMQRELALLNARS

Intron Amino Acid Position:
385

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83.6
0.79
0.9
82.6
29.4

Major BPS
65.2
0.38
1.3
73.4
38.5

Major PPT
82.1
0.72
0.8
76.8
32

Minor 5ss
35.2
-1.7
3
49.1
46.7

Minor BPS
45.2
-0.2
2.1
68.1
42.9

Associated Gene:

Gene:
ASCC3

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

73875627 - 74137072
261446