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Intron Name: Anas_platyrhynchos_platyrhynchos_3_7392437_7393157_R


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
7392437 - 7393157

Intron Length:
721

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GGG|GTATGTAAA

5'SS Class:
strong_major

3'SS Sequence:
CTCTGTGTTCAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTGAT

U12 Branch Point Sequence:
TAGTTGTTAATA

Flanking Amino Acid:
EPHSCQYILGVESPVICKIL

Intron Amino Acid Position:
437

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
80.1
0.71
1
75.9
35.2

Major BPS
96.4
1.15
0.6
85.7
34.9

Major PPT
65.7
0.35
1.1
62.8
42.3

Minor 5ss
40.7
-1
2.5
42.1
44.8

Minor BPS
56.5
0.2
2
67.58
39.5

Associated Gene:

Gene:
ERLEC1

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7392365 - 7405396
13032