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Intron Name: Anas_platyrhynchos_platyrhynchos_3_7394361_7395473_R


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
7394361 - 7395473

Intron Length:
1113

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GGG|GTAAGAAAT

5'SS Class:
strong_major

3'SS Sequence:
TACCTGTCCCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TTCATTTTAATG

Flanking Amino Acid:
FLSGSYCFHGGVGWWKYEFC

Intron Amino Acid Position:
324

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
84.2
0.81
0.9
80.7
33.7

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
66.2
0.36
0.9
57.9
38.2

Minor 5ss
34.7
-1.7
3
41.3
44.8

Minor BPS
62.4
0.25
1.4
62.86
40.1

Associated Gene:

Gene:
ERLEC1

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7392365 - 7405396
13032