Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_74035169_74035495_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

74035169 - 74035495

Intron Length:

327

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTCAACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATTAACT

Flanking Amino Acid:

NLPAHAVVIKGTQIYAAKRG

Intron Amino Acid Position:

828

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.2

26.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

73.5

0.53

0.9

67.6

Minor 5ss

32.1

-2

3.5

46.6

48.7

Minor BPS

80.9

1.05

1.4

96.98

27.1

Associated Gene:

Gene:

ASCC3

Ensembl Gene ID:

ENSAPLG00000012589

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013180

73875627 - 74137072

261446