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Intron Name: Anas_platyrhynchos_platyrhynchos_3_7405055_7405252_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
7405055 - 7405252

Intron Length:
198

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTG|GTGGGTGCG

5'SS Class:
major

3'SS Sequence:
TGTTTGTTTTAAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GGTTCAC

U12 Branch Point Sequence:
GTTTGTTTTAAG

Flanking Amino Acid:
VNWPGTEFSLPTTGVLYKED

Intron Amino Acid Position:
49

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72
0.52
1
58.5
40.7

Major BPS
57.1
0.18
1.3
63.1
44.5

Major PPT
75.5
0.57
1.1
79.2
38.4

Minor 5ss
26.3
-2.7
3.2
28.5
38.7

Minor BPS
46.1
-0.4
2.2
57.03
44.3

Associated Gene:

Gene:
ERLEC1

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7392365 - 7405396
13032