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Intron Name: Anas_platyrhynchos_platyrhynchos_3_74136827_74136924_F


Intron Information:

Intron Rank:
40

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
74136827 - 74136924

Intron Length:
98

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAA|GTATGACAA

5'SS Class:
major

3'SS Sequence:
TTTTACATTTTAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTACAT

U12 Branch Point Sequence:
TGTTTTTTACAT

Flanking Amino Acid:
VAFYTPETPGKCIYTLYLMS

Intron Amino Acid Position:
2148

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.9
0.52
1
63.3
36.7

Major BPS
82.7
0.81
0.9
89.3
26.1

Major PPT
81.2
0.7
0.8
79.1
33.8

Minor 5ss
39.1
-1.2
3
47.6
42.4

Minor BPS
58.9
0.36
1.7
77.19
39.4

Associated Gene:

Gene:
ASCC3

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

73875627 - 74137072
261446