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Intron Name: Anas_platyrhynchos_platyrhynchos_3_74160244_74168463_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

74160244 - 74168463

Intron Length:

8220

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGGG

5'SS Class:

strong_major

3'SS Sequence:

CTCAAATAAACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTGTCTCAAAT

Flanking Amino Acid:

YLKMRVVFPEGLGEAWGHSS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

67.1

44.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

57.5

0.17

1.1

51.3

40.7

Minor 5ss

30.7

-2.2

3.4

40.1

Minor BPS

54.9

0.23

1.8

74.04

42.5

Associated Gene:

Gene:

SIM1

Ensembl Gene ID:

ENSAPLG00000012534

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013053

74160069 - 74203655

43587