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Intron Name: Anas_platyrhynchos_platyrhynchos_3_74169662_74169754_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

74169662 - 74169754

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TAG|GCTGGGGGA

5'SS Class:

major

3'SS Sequence:

CTCTCACAGGTAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

TCCTCTCTCACA

Flanking Amino Acid:

ASVHLGLSQVELTGNSIYEY

Intron Amino Acid Position:

118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.2

62.4

39.3

Major BPS

72.7

0.56

30.1

Major PPT

58.6

0.19

55.3

34.4

Minor 5ss

13.2

-4.3

3.7

20.6

37.6

Minor BPS

48.8

-0.1

2.1

63.12

43.7

Associated Gene:

Gene:

SIM1

Ensembl Gene ID:

ENSAPLG00000012534

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013053

74160069 - 74203655

43587