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Intron Name: Anas_platyrhynchos_platyrhynchos_3_74169860_74169978_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

74169860 - 74169978

Intron Length:

119

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAAGTGC

5'SS Class:

major

3'SS Sequence:

TTCCCCCTCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAC

U12 Branch Point Sequence:

CTCACCGCACCT

Flanking Amino Acid:

HQPYHSHFVQEYEIERSFFL

Intron Amino Acid Position:

153

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.7

0.46

1.1

58.1

42.1

Major BPS

0.28

1.1

63.1

35.8

Major PPT

77.4

0.62

0.7

69.1

31.4

Minor 5ss

-1.6

3.3

41.1

45.6

Minor BPS

41.5

-0.5

2.4

60.31

48.9

Associated Gene:

Gene:

SIM1

Ensembl Gene ID:

ENSAPLG00000012534

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013053

74160069 - 74203655

43587